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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6599178_6602002_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6599178 - 6602002

Intron Length:

2825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGTTA

5'SS Class:

major

3'SS Sequence:

TCATTTTCTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTTTTCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

68.5

38.9

Major BPS

100

1.24

0.5

100

Major PPT

0.7

0.8

76.7

31.8

Minor 5ss

-1.2

3.6

55.3

48.9

Minor BPS

62.8

0.48

1.7

81.14

35.2

Associated Gene:

Gene:

PHF20

Ensembl Gene ID:

ENSAPLG00000003088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027561

6599130 - 6666121

66992

ENSAPLT00000003177

6599130 - 6666121

66992