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Intron Name: Anas_platyrhynchos_platyrhynchos_21_660094_660909_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

660094 - 660909

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTTTTCTACACT

Flanking Amino Acid:

PMMDTEYTKLWTPLLQALIG

Intron Amino Acid Position:

865

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

72.4

38.6

Major BPS

81.9

0.79

0.9

80.1

Major PPT

78.2

0.64

0.8

73.8

30.3

Minor 5ss

41.3

-1

2.5

48.1

42.7

Minor BPS

62.2

0.47

2.1

86.99

39.2

Associated Gene:

Gene:

CSE1L

Ensembl Gene ID:

ENSAPLG00000010368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010876

659079 - 678463

19385