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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6623217_6631092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6623217 - 6631092

Intron Length:

7876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTAAATT

5'SS Class:

major

3'SS Sequence:

TTTGTTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTGTTCTTACAG

Flanking Amino Acid:

AVGTQEPSAAVTKPFRRADF

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.2

71.7

37.6

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

89.6

0.89

0.7

84.2

30.9

Minor 5ss

41.2

-1

58.4

45.8

Minor BPS

56.4

0.06

1.8

63.83

44.2

Associated Gene:

Gene:

PHF20

Ensembl Gene ID:

ENSAPLG00000003088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025208

6608568 - 6666121

57554

ENSAPLT00000017982

6603669 - 6666121

62453

ENSAPLT00000003177

6599130 - 6666121

66992

ENSAPLT00000027561

6599130 - 6666121

66992