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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6623217_6641941_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6623217 - 6641941

Intron Length:

18725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTAAATT

5'SS Class:

major

3'SS Sequence:

ATTCTCTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TCATCTTTATTC

Flanking Amino Acid:

AVGTQEPSAADAPLRIALRS

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.2

71.7

37.6

Major BPS

81.6

0.78

0.8

24.9

Major PPT

82.5

0.73

0.7

77.8

30.2

Minor 5ss

41.2

-1

58.4

45.8

Minor BPS

0.33

1.6

66.51

39.9

Associated Gene:

Gene:

PHF20

Ensembl Gene ID:

ENSAPLG00000003088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043814

6603669 - 6666121

62453