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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6663065_6665978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6663065 - 6665978

Intron Length:

2914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

GAGAACTGAAAT

Flanking Amino Acid:

RMDFIEKELDVLESWLDYTG

Intron Amino Acid Position:

952

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

65.5

39.9

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

92.7

0.96

0.6

88.4

21.2

Minor 5ss

31.8

-2.1

3.4

40.2

41.3

Minor BPS

-0.2

1.7

58.85

42.8

Associated Gene:

Gene:

PHF20

Ensembl Gene ID:

ENSAPLG00000003088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025208

6608568 - 6666121

57554

ENSAPLT00000017982

6603669 - 6666121

62453

ENSAPLT00000003177

6599130 - 6666121

66992

ENSAPLT00000043814

6603669 - 6666121

62453

ENSAPLT00000027561

6599130 - 6666121

66992