Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_6675009_6675086_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6675009 - 6675086

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

TTGTTCCCCACA

Flanking Amino Acid:

PTPSPMPTQAAPNSFLALAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

78.9

0.65

0.8

73.3

31.8

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

45.4

-0.3

2.2

63.73

42.7

Associated Gene:

Gene:

SLA2

Ensembl Gene ID:

ENSAPLG00000002986

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003030

6672453 - 6675235

2783