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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6682417_6682929_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6682417 - 6682929

Intron Length:

513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTTCA

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

CTTTTCTAAGCC

Flanking Amino Acid:

VQLSHLSTESVPAASMTRLI

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

68.8

38.9

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

89.1

0.88

0.6

84.4

23.4

Minor 5ss

-0.5

2.8

59.8

44.6

Minor BPS

54.8

0.13

1.9

69.35

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033463

6682238 - 6735163

52926

ENSAPLT00000002741

6680858 - 6735163

54306