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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6682417_6684656_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6682417 - 6684656

Intron Length:

2240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

CTTTTCTAAGCC

Flanking Amino Acid:

FKYFVQGMGYMPAASMTRLI

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

64.6

40.3

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

89.1

0.88

0.6

84.4

23.4

Minor 5ss

35.2

-1.7

3.3

49.2

41.2

Minor BPS

54.8

0.13

1.9

69.35

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044939

6682238 - 6735163

52926