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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6684709_6684800_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6684709 - 6684800

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TAATGCTGCACT

Flanking Amino Acid:

DCGGLPQVVQPGKLTEAFKY

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.8

83.3

27.9

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

0.7

0.8

75.9

32.8

Minor 5ss

30.7

-2.2

2.9

41.1

44.9

Minor BPS

47.5

-0.1

2.3

71.12

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033449

6683835 - 6711968

28134

ENSAPLT00000002741

6680858 - 6735163

54306

ENSAPLT00000044939

6682238 - 6735163

52926

ENSAPLT00000033463

6682238 - 6735163

52926