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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6684837_6685523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6684837 - 6685523

Intron Length:

687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACCCAA

U12 Branch Point Sequence:

ACAACCCAACCT

Flanking Amino Acid:

LDPTKTTLLKMADCGGLPQV

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.7

26.7

Major BPS

48.6

-0

1.1

56.4

30.9

Major PPT

0.88

0.8

84.5

30.4

Minor 5ss

31.6

-2.1

2.6

37.4

Minor BPS

41.3

-0.5

2.1

56.59

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044939

6682238 - 6735163

52926

ENSAPLT00000033463

6682238 - 6735163

52926

ENSAPLT00000033449

6683835 - 6711968

28134

ENSAPLT00000002741

6680858 - 6735163

54306