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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6778007_6778276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6778007 - 6778276

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAAAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

CTCTACTCAAAT

Flanking Amino Acid:

PHHFGTIKSEVVLEGKYSND

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

31.4

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

88.3

0.86

0.7

86.1

27.6

Minor 5ss

33.8

-1.8

2.9

43.3

43.9

Minor BPS

51.4

0.12

1.9

70.58

45.7

Associated Gene:

Gene:

RALGAPB

Ensembl Gene ID:

ENSAPLG00000002476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023498

6752681 - 6808058

55378

ENSAPLT00000002581

6752681 - 6807305

54625