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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6778425_6780974_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6778425 - 6780974

Intron Length:

2550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATTCA

5'SS Class:

strong_major

3'SS Sequence:

ATCTAATCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TTTCATCTAATC

Flanking Amino Acid:

TDPNNTQMILGAMLNIVQDS

Intron Amino Acid Position:

695

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.1

28.4

Major BPS

85.7

0.89

0.8

22.2

Major PPT

75.1

0.56

0.9

70.8

39.2

Minor 5ss

39.8

-1.1

2.8

50.7

45.7

Minor BPS

52.4

0.05

1.8

69.62

35.5

Associated Gene:

Gene:

RALGAPB

Ensembl Gene ID:

ENSAPLG00000002476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023498

6752681 - 6808058

55378

ENSAPLT00000002581

6752681 - 6807305

54625