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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6781040_6781228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6781040 - 6781228

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCAATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TATCACTTAAAA

Flanking Amino Acid:

LEAIGCQMETNGGENNLFKS

Intron Amino Acid Position:

717

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

81.9

32.3

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

83.7

0.76

0.8

77.6

35.3

Minor 5ss

44.4

-0.6

3.2

66.3

44.6

Minor BPS

63.4

0.42

1.6

73.22

37.3

Associated Gene:

Gene:

RALGAPB

Ensembl Gene ID:

ENSAPLG00000002476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023498

6752681 - 6808058

55378

ENSAPLT00000002581

6752681 - 6807305

54625