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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6781362_6783222_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6781362 - 6783222

Intron Length:

1861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

GGTTATATCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTATAT

U12 Branch Point Sequence:

CCCTCCCTATGC

Flanking Amino Acid:

RPAQALLRDYALNTDTAAGL

Intron Amino Acid Position:

761

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

80.5

33.7

Major BPS

61.5

0.29

1.3

45.5

Major PPT

64.7

0.33

55.5

44.3

Minor 5ss

-1.6

3.3

45.4

43.9

Minor BPS

43.1

-0.5

2.1

50.15

46.7

Associated Gene:

Gene:

RALGAPB

Ensembl Gene ID:

ENSAPLG00000002476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023498

6752681 - 6808058

55378

ENSAPLT00000002581

6752681 - 6807305

54625