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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6783357_6786578_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6783357 - 6786578

Intron Length:

3222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CTTGCTTTTATA

Flanking Amino Acid:

ALELLSGLAKVKVTVDSSDQ

Intron Amino Acid Position:

806

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.7

0.9

76.3

36.9

Minor 5ss

26.7

-2.7

3.3

37.5

47.2

Minor BPS

55.1

0.15

1.7

66.16

Associated Gene:

Gene:

RALGAPB

Ensembl Gene ID:

ENSAPLG00000002476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023498

6752681 - 6808058

55378

ENSAPLT00000002581

6752681 - 6807305

54625