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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6788744_6790542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6788744 - 6790542

Intron Length:

1799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTCA

5'SS Class:

major

3'SS Sequence:

ATGTGTTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

ATTCTTTTAACC

Flanking Amino Acid:

MLEQPLGNEQNDSFPSVTVL

Intron Amino Acid Position:

980

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

71.4

35.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

79.4

0.66

0.9

72.7

41.8

Minor 5ss

41.8

-0.9

2.7

47.2

42.3

Minor BPS

73.7

0.72

1.1

77.75

31.1

Associated Gene:

Gene:

RALGAPB

Ensembl Gene ID:

ENSAPLG00000002476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023498

6752681 - 6808058

55378

ENSAPLT00000002581

6752681 - 6807305

54625