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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6793021_6793660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6793021 - 6793660

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

AATGTCTGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

GTCAACTCAACA

Flanking Amino Acid:

PDLHEIVNEELEERHEKLRN

Intron Amino Acid Position:

1067

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

78.2

0.7

77.9

32.1

Major PPT

69.1

0.43

1.1

62.5

43.4

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

50.6

0.01

1.8

62.67

42.8

Associated Gene:

Gene:

RALGAPB

Ensembl Gene ID:

ENSAPLG00000002476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023498

6752681 - 6808058

55378

ENSAPLT00000002581

6752681 - 6807305

54625