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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6794846_6797609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6794846 - 6797609

Intron Length:

2764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTGGTTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATACCAT

U12 Branch Point Sequence:

TGTCCAATACCA

Flanking Amino Acid:

MKAGQKTSQEILKNMESSRI

Intron Amino Acid Position:

1190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.8

81.8

38.5

Major BPS

56.8

0.17

1.3

66.9

39.3

Major PPT

75.8

0.58

72.6

42.4

Minor 5ss

37.8

-1.4

49.5

46.7

Minor BPS

46.3

-0.2

2.1

64.36

41.1

Associated Gene:

Gene:

RALGAPB

Ensembl Gene ID:

ENSAPLG00000002476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023498

6752681 - 6808058

55378

ENSAPLT00000002581

6752681 - 6807305

54625