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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6797776_6799696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6797776 - 6799696

Intron Length:

1921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

TTCCTCTTAACT

Flanking Amino Acid:

NCSDEEGPEQDDAVISEDVG

Intron Amino Acid Position:

1245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

36.7

Major BPS

77.1

0.67

77.9

32.2

Major PPT

75.6

0.58

0.9

72.4

37.7

Minor 5ss

-1.9

3.3

46.8

48.5

Minor BPS

79.8

1.01

1.1

88.99

35.6

Associated Gene:

Gene:

RALGAPB

Ensembl Gene ID:

ENSAPLG00000002476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023498

6752681 - 6808058

55378

ENSAPLT00000002581

6752681 - 6807305

54625