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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6799820_6800226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6799820 - 6800226

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGAGCG

5'SS Class:

major

3'SS Sequence:

CTTTTGGTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

TTTTGGTTACAG

Flanking Amino Acid:

FVVPSPVESLTDSLESNVSD

Intron Amino Acid Position:

1286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

66.2

Major BPS

77.7

0.69

83.3

27.7

Major PPT

81.9

0.72

0.9

75.6

38.3

Minor 5ss

32.5

-2

3.3

40.1

39.6

Minor BPS

43.3

-0.6

2.6

60.06

47.5

Associated Gene:

Gene:

RALGAPB

Ensembl Gene ID:

ENSAPLG00000002476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023498

6752681 - 6808058

55378

ENSAPLT00000002581

6752681 - 6807305

54625