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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6855200_6856851_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6855200 - 6856851

Intron Length:

1652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

CCACTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

TCTCTTCCCACT

Flanking Amino Acid:

SASTLAWQAEEPPEDDANII

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

66.4

0.37

0.9

38.5

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

41.4

-0.6

2.1

61.49

42.7

Associated Gene:

Gene:

CHD6

Ensembl Gene ID:

ENSAPLG00000015592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016290

6848983 - 6864728

15746