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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6857841_6859063_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6857841 - 6859063

Intron Length:

1223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGATCTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCACCTTGAATT

Flanking Amino Acid:

QAQMKHIFTEPDEDLFNPDY

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.65

0.9

72.7

37.3

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

59.2

0.37

1.4

71.07

40.1

Associated Gene:

Gene:

CHD6

Ensembl Gene ID:

ENSAPLG00000015592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016290

6848983 - 6864728

15746