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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6861476_6862071_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6861476 - 6862071

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCACG

5'SS Class:

major

3'SS Sequence:

TGTGTATACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAA

U12 Branch Point Sequence:

GAGCCCTCAACC

Flanking Amino Acid:

LLEGLKLMALEHKVLLTGTP

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

64.1

41.7

Major BPS

60.8

0.27

1.1

63.2

34.1

Major PPT

68.4

0.42

42.8

Minor 5ss

34.4

-1.8

2.8

40.8

Minor BPS

58.1

0.23

1.6

62.82

41.8

Associated Gene:

Gene:

CHD6

Ensembl Gene ID:

ENSAPLG00000015592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016290

6848983 - 6864728

15746