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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6863885_6864277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6863885 - 6864277

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTTAGTACA

5'SS Class:

major

3'SS Sequence:

CCTCTTGGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CATGTCTTACCC

Flanking Amino Acid:

DILEDYLIQRRYTYERIDGR

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

73.1

37.6

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

0.32

1.1

57.6

42.1

Minor 5ss

32.9

-2

2.4

37.7

39.2

Minor BPS

53.7

0.1

1.8

62.38

43.4

Associated Gene:

Gene:

CHD6

Ensembl Gene ID:

ENSAPLG00000015592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016290

6848983 - 6864728

15746