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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6893711_6897313_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6893711 - 6897313

Intron Length:

3603

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGA|GCAGGATGT

5'SS Class:

weak_major

3'SS Sequence:

GTTTAGACTTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTAGAC

U12 Branch Point Sequence:

CTAGTTTAGACT

Flanking Amino Acid:

EQTPPLSAEKDLILSEGGWD

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.18

1.3

53.8

Major BPS

69.3

0.48

1.1

66.7

Major PPT

50.2

1.7

59.6

45.7

Minor 5ss

29.2

-2.4

4.3

42.8

45.4

Minor BPS

46.9

-0.1

1.8

62.04

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036000

6892503 - 6897404

4902