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Intron Name: Anas_platyrhynchos_platyrhynchos_21_690160_690523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

690160 - 690523

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTTT

5'SS Class:

strong_major

3'SS Sequence:

GCTCATCTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTTATTTAATA

Flanking Amino Acid:

CAKYVSERPQVLREYTSDDM

Intron Amino Acid Position:

1333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

82.4

30.8

Major BPS

90.7

1.01

0.7

19.9

Major PPT

61.3

0.26

1.1

63.7

36.9

Minor 5ss

58.1

0.27

2.3

39.6

Minor BPS

76.1

0.82

1.3

84.11

29.4

Associated Gene:

Gene:

ARFGEF2

Ensembl Gene ID:

ENSAPLG00000010118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042920

684618 - 716787

32170

ENSAPLT00000010669

684679 - 715920

31242