Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_6913303_6915434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6913303 - 6915434

Intron Length:

2132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTTGTGGAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTCAA

U12 Branch Point Sequence:

TACAAGTCAATT

Flanking Amino Acid:

APSEQLITIFDIGLHQLKLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

74.4

Major BPS

0.23

1.1

61.4

36.2

Major PPT

63.8

0.31

1.1

58.7

45.5

Minor 5ss

37.3

-1.4

2.6

40.4

39.1

Minor BPS

-0.5

2.3

59.18

43.9

Associated Gene:

Gene:

RBL1

Ensembl Gene ID:

ENSAPLG00000014817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028342

6913205 - 6928847

15643