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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6925522_6925711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6925522 - 6925711

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

TTGTTAAGAACT

Flanking Amino Acid:

YRNQPQANSHVYRSVLLRNY

Intron Amino Acid Position:

721

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

81.4

26.2

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

74.6

0.55

0.9

68.9

37.3

Minor 5ss

-2.1

2.7

37.8

40.1

Minor BPS

74.95

41.3

Associated Gene:

Gene:

RBL1

Ensembl Gene ID:

ENSAPLG00000014817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038231

6901269 - 6928847

27579

ENSAPLT00000017510

6900580 - 6928847

28268

ENSAPLT00000015493

6901083 - 6928847

27765