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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6928408_6928727_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6928408 - 6928727

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAAAAT

5'SS Class:

major

3'SS Sequence:

ACACAGGAGTAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TATGATAAAACA

Flanking Amino Acid:

LYKFNGSPSKKRAITIDSDT

Intron Amino Acid Position:

850

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

36.4

Major BPS

75.8

0.64

65.8

Major PPT

42.9

-0.4

1.1

34.1

39.2

Minor 5ss

33.1

-1.9

3.4

47.7

Minor BPS

43.6

-0.4

2.1

58.16

41.3

Associated Gene:

Gene:

RBL1

Ensembl Gene ID:

ENSAPLG00000014817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015493

6901083 - 6928847

27765