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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6939911_6940933_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6939911 - 6940933

Intron Length:

1023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCATT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATGTTTTTCACA

Flanking Amino Acid:

PLTREGLKWKHETASVQMFE

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

81.8

38.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.3

0.7

0.9

76.3

37.2

Minor 5ss

43.9

-0.7

3.2

65.5

45.8

Minor BPS

57.8

0.24

1.7

68.54

38.5

Associated Gene:

Gene:

SAMHD1

Ensembl Gene ID:

ENSAPLG00000014604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039187

6935835 - 6955079

19245

ENSAPLT00000015235

6933971 - 6954372

20402

ENSAPLT00000041120

6932929 - 6955479

22551