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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6948491_6951052_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6948491 - 6951052

Intron Length:

2562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAAAAAT

U12 Branch Point Sequence:

ACGGGCTGAGCT

Flanking Amino Acid:

QPEKVNEIPKDEYDGLADEI

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.3

31.6

Major BPS

50.5

0.01

1.1

57.3

34.4

Major PPT

94.5

0.6

29.4

Minor 5ss

38.3

-1.3

49.1

46.6

Minor BPS

41.8

-0.5

2.1

54.7

46.9

Associated Gene:

Gene:

SAMHD1

Ensembl Gene ID:

ENSAPLG00000014604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041120

6932929 - 6955479

22551

ENSAPLT00000039187

6935835 - 6955079

19245

ENSAPLT00000015235

6933971 - 6954372

20402