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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6957357_6957439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6957357 - 6957439

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGTC

5'SS Class:

strong_major

3'SS Sequence:

CTGCACCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAC

U12 Branch Point Sequence:

GCCTCTGCACCT

Flanking Amino Acid:

DVDLLMVGGGSGRFGLWLDG

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

75.5

34.4

Major BPS

52.5

0.06

1.4

65.3

41.6

Major PPT

72.3

0.5

0.9

61.9

39.6

Minor 5ss

32.4

-2

3.9

48.7

47.8

Minor BPS

40.7

-0.6

2.3

55.88

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044990

6957221 - 6959227

2007

ENSAPLT00000015212

6957221 - 6960028

2808