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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7039588_7041299_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7039588 - 7041299

Intron Length:

1712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

CAGACCTAAAAA

Flanking Amino Acid:

ATSESTVQRTELETNAPVVA

Intron Amino Acid Position:

1888

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

68.1

0.45

58.1

38.5

Major PPT

0.88

0.6

85.4

21.8

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

-0.1

1.8

54.46

43.8

Associated Gene:

Gene:

NCOA6

Ensembl Gene ID:

ENSAPLG00000013856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039361

7037150 - 7064440

27291

ENSAPLT00000014448

7033323 - 7064440

31118