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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7041369_7043358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7041369 - 7043358

Intron Length:

1990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTATTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTCCCCTCCACT

Flanking Amino Acid:

GSHQELLQNTASSQHLTQKK

Intron Amino Acid Position:

1865

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

23.1

Major BPS

71.2

0.53

70.3

31.9

Major PPT

75.3

0.57

0.9

38.6

Minor 5ss

40.5

-1.1

2.7

50.7

45.7

Minor BPS

55.8

0.26

77.75

44.4

Associated Gene:

Gene:

NCOA6

Ensembl Gene ID:

ENSAPLG00000013856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039361

7037150 - 7064440

27291

ENSAPLT00000014448

7033323 - 7064440

31118