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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7054863_7057709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7054863 - 7057709

Intron Length:

2847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGTATCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

CTTTTCACACTT

Flanking Amino Acid:

GPQGLHPGLGGMPKRLPPGF

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

0.43

1.1

67.9

41.8

Minor 5ss

35.2

-1.7

49.5

46.3

Minor BPS

45.9

-0.2

68.25

43.2

Associated Gene:

Gene:

NCOA6

Ensembl Gene ID:

ENSAPLG00000013856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033282

7033323 - 7064440

31118

ENSAPLT00000014448

7033323 - 7064440

31118

ENSAPLT00000039361

7037150 - 7064440

27291