Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_706914_707824_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

706914 - 707824

Intron Length:

911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTTAT

5'SS Class:

major

3'SS Sequence:

TGGAATTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTATAT

U12 Branch Point Sequence:

TTTTGTGGAATT

Flanking Amino Acid:

DEGVQLQIIKALLTAVTSPY

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

78.6

31.1

Major BPS

55.3

0.13

1.2

52.8

42.9

Major PPT

73.8

0.53

69.6

45.6

Minor 5ss

-0.2

2.5

66.9

44.3

Minor BPS

47.2

-0.1

2.4

76.06

41.4

Associated Gene:

Gene:

ARFGEF2

Ensembl Gene ID:

ENSAPLG00000010118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042920

684618 - 716787

32170

ENSAPLT00000010669

684679 - 715920

31242