Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_7085501_7086221_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7085501 - 7086221

Intron Length:

721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CATTCTCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TACTTTTTTACT

Flanking Amino Acid:

GDKALSGIVQVLVNVLALNK

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

78.6

0.64

0.8

31.4

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

61.8

0.45

1.6

75.92

41.3

Associated Gene:

Gene:

GGT7

Ensembl Gene ID:

ENSAPLG00000013413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013980

7081350 - 7100904

19555