Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_7094927_7095649_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7094927 - 7095649

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTGGT

5'SS Class:

major

3'SS Sequence:

ACTTTTGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGCCAT

U12 Branch Point Sequence:

CATGCCATGACC

Flanking Amino Acid:

IVNPHVSGIGGGGVMLVHDI

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

67.1

44.6

Major BPS

53.4

0.08

1.4

64.2

Major PPT

74.7

0.56

0.9

68.7

36.7

Minor 5ss

32.6

-2

3.5

40.1

Minor BPS

53.2

0.08

1.8

63.6

42.1

Associated Gene:

Gene:

GGT7

Ensembl Gene ID:

ENSAPLG00000013413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013980

7081350 - 7100904

19555