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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7138638_7139091_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7138638 - 7139091

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTGATCTCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TGCTATTTAATA

Flanking Amino Acid:

SIGVQVEDEWRNSHSRSMSS

Intron Amino Acid Position:

769

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

31.9

Major BPS

90.7

1.01

0.7

19.9

Major PPT

71.1

0.47

0.9

62.5

39.6

Minor 5ss

32.5

-2

3.2

40.8

45.4

Minor BPS

63.4

0.42

1.5

68.68

38.1

Associated Gene:

Gene:

DLGAP4

Ensembl Gene ID:

ENSAPLG00000012891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032178

7133137 - 7144409

11273

ENSAPLT00000046168

7133137 - 7281715

148579

ENSAPLT00000025116

7133713 - 7173085

39373

ENSAPLT00000039950

7133137 - 7260374

127238

ENSAPLT00000023694

7133713 - 7173114

39402

ENSAPLT00000038217

7133713 - 7141383

7671

ENSAPLT00000013457

7133137 - 7283068

149932

ENSAPLT00000035844

7133137 - 7283068

149932

ENSAPLT00000046680

7133137 - 7281715

148579