Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_7260375_7281161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7260375 - 7281161

Intron Length:

20787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGAAGC

5'SS Class:

major

3'SS Sequence:

TTGTCCTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

CCTTCCTGAACT

Flanking Amino Acid:

VSLGATLHLRVPRSIVKQLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.1

58.9

40.3

Major BPS

69.6

0.49

59.5

Major PPT

79.5

0.66

0.8

77.6

31.2

Minor 5ss

30.4

-2.2

2.9

35.8

40.7

Minor BPS

74.9

0.86

1.4

84.75

41.8

Associated Gene:

Gene:

DLGAP4

Ensembl Gene ID:

ENSAPLG00000012891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046680

7133137 - 7281715

148579

ENSAPLT00000046168

7133137 - 7281715

148579