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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7326106_7328559_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7326106 - 7328559

Intron Length:

2454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTAATGACA

Flanking Amino Acid:

QDNFLTSTLQVFFSYTCNAA

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.9

44.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.8

0.74

0.7

81.2

30.9

Minor 5ss

36.8

-1.5

3.2

49.6

46.6

Minor BPS

56.1

0.19

1.9

76.4

33.8

Associated Gene:

Gene:

AAR2

Ensembl Gene ID:

ENSAPLG00000012763

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013288

7324855 - 7330947

6093