Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_7358080_7360978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7358080 - 7360978

Intron Length:

2899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGACC

5'SS Class:

major

3'SS Sequence:

CTCCTTCCCCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GTGCTTTAACCA

Flanking Amino Acid:

TTPTKIKELKFLDKPEDVLL

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

40.4

Major BPS

77.3

0.68

79.3

29.4

Major PPT

65.2

0.34

63.5

31.8

Minor 5ss

31.8

-2.1

3.4

43.8

43.7

Minor BPS

44.2

-0.4

1.8

52.27

40.3

Associated Gene:

Gene:

EPB41L1

Ensembl Gene ID:

ENSAPLG00000012144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024183

7334963 - 7398386

63424