Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_7366108_7369121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7366108 - 7369121

Intron Length:

3014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

GTATCTCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

CTCTCTGTATCT

Flanking Amino Acid:

DASEYECEVEKHARGQVLFD

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

76.9

0.6

0.9

70.3

36.1

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

48.6

-0

2.3

70.73

46.8

Associated Gene:

Gene:

EPB41L1

Ensembl Gene ID:

ENSAPLG00000012144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012674

7334963 - 7398386

63424

ENSAPLT00000024183

7334963 - 7398386

63424