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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7466381_7487822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7466381 - 7487822

Intron Length:

21442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAACAA

U12 Branch Point Sequence:

AACCCTCTAAGT

Flanking Amino Acid:

AAAGEKKEKRRYSHRAREEW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

73.1

43.9

Major BPS

0.1

1.1

61.6

34.2

Major PPT

90.7

0.92

0.7

88.9

28.1

Minor 5ss

41.6

-0.9

58.6

45.7

Minor BPS

46.6

-0.1

1.9

61.62

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032605

7443333 - 7492651

49319