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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7668151_7670832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7668151 - 7670832

Intron Length:

2682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TGCTTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TTTTACACAAAT

Flanking Amino Acid:

MLNRVMEKGSVKCAQYWPRK

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.3

82.1

37.7

Major BPS

74.5

0.61

79.6

29.1

Major PPT

78.8

0.65

0.9

76.8

37.4

Minor 5ss

43.5

-0.7

2.9

65.1

39.1

Minor BPS

50.5

0.09

2.1

80.34

40.5

Associated Gene:

Gene:

PTPN1

Ensembl Gene ID:

ENSAPLG00000008547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031671

7636129 - 7677648

41520

ENSAPLT00000008897

7640298 - 7677140

36843