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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7670971_7672274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7670971 - 7672274

Intron Length:

1304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

CTGTCTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

TGTCTCTTACAG

Flanking Amino Acid:

VRQLELENLTTQETREILHF

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

72.9

36.6

Major BPS

64.9

0.37

37.5

Major PPT

82.3

0.73

0.8

76.1

32.6

Minor 5ss

39.2

-1.2

2.7

37.4

Minor BPS

49.9

-0.1

1.8

58.62

42.7

Associated Gene:

Gene:

PTPN1

Ensembl Gene ID:

ENSAPLG00000008547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031671

7636129 - 7677648

41520

ENSAPLT00000008897

7640298 - 7677140

36843