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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7672485_7673234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7672485 - 7673234

Intron Length:

750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTACCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

CATTTTGTACCT

Flanking Amino Acid:

FCLVDTCLLLMDKRKDPSSV

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.8

0.9

74.3

34.1

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

82.1

0.72

0.8

78.8

34.8

Minor 5ss

33.2

-1.9

3.4

45.7

43.4

Minor BPS

46.8

-0.1

2.2

67.59

Associated Gene:

Gene:

PTPN1

Ensembl Gene ID:

ENSAPLG00000008547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031671

7636129 - 7677648

41520

ENSAPLT00000008897

7640298 - 7677140

36843