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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7673397_7673904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7673397 - 7673904

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTTTCCTGAAG

Flanking Amino Acid:

KFIMGDASVQEQWKELSNED

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

83.3

27.9

Major BPS

71.2

0.53

70.3

31.9

Major PPT

81.8

0.72

0.9

24.6

Minor 5ss

34.6

-1.7

2.8

44.2

Minor BPS

54.5

-0

1.9

68.2

39.1

Associated Gene:

Gene:

PTPN1

Ensembl Gene ID:

ENSAPLG00000008547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031671

7636129 - 7677648

41520

ENSAPLT00000008897

7640298 - 7677140

36843