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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7683280_7684211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7683280 - 7684211

Intron Length:

932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCAAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTCAAAC

Flanking Amino Acid:

AACLALKNLRAVESIEQVAH

Intron Amino Acid Position:

844

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

80.9

0.69

0.9

78.5

33.8

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

62.9

0.39

1.6

75.4

34.8

Associated Gene:

Gene:

RIPOR3

Ensembl Gene ID:

ENSAPLG00000007994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035847

7682113 - 7709318

27206

ENSAPLT00000027506

7681748 - 7733434

51687

ENSAPLT00000018174

7681748 - 7707070

25323

ENSAPLT00000008327

7682113 - 7710875

28763

ENSAPLT00000045647

7681748 - 7706849

25102