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Intron Name: Anas_platyrhynchos_platyrhynchos_21_7686367_7686960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7686367 - 7686960

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTGACTTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TTTTCCTAAAAT

Flanking Amino Acid:

GDVLDTSVEEIIQKTKKKKH

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

80.3

26.9

Major BPS

72.7

0.57

72.1

31.1

Major PPT

77.9

0.63

0.9

73.6

41.5

Minor 5ss

32.3

-2

2.7

33.9

Minor BPS

75.3

0.87

1.7

93.4

34.6

Associated Gene:

Gene:

RIPOR3

Ensembl Gene ID:

ENSAPLG00000007994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018174

7681748 - 7707070

25323

ENSAPLT00000008327

7682113 - 7710875

28763

ENSAPLT00000045647

7681748 - 7706849

25102

ENSAPLT00000035847

7682113 - 7709318

27206

ENSAPLT00000027506

7681748 - 7733434

51687